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3.1 Papers
Section Intro | Molecular modeling | Bioinformatics | docking | Methods and algorithms | Applications | Chronological list

3.1.5 Applications


1993
26. Gibson, T.J., Thompson, J.D. and Abagyan, R.A (1993). Proposed structure for the DNA-binding Domain of the Helix-Loop-Helix family of eucaryotic gene regulatory proteins. Protein Engineering, 6, 41-50 [Abs.]

1996
41. Goodman, A.R., Cardozo, T., Abagyan, R.A., Altmeyer, A., Wisniewski, H.G., and Vilcek, J. (1996). Long Pentraxins: an Emerging Group of Proteins with Diverse Functions. Cytokine & Growth Factor Reviews, 7, 191-202 [Abs.]

1997
53. Mathieu, M., Modis, Y., Zeelen, J. Ph., Engel, C.K., Abagyan, R.A., Ahlberg, A., Rasmussen, B., Lamzin, V.S., Kunau W.H., and Wierenga, R.K. (1997). The 1.8 Crystal Structure of the Dimeric Peroxisomal 3-Ketoacyl-CoA Thiolase of Saccharomyces cerevisiae: Implications for Substrate Binding and Reaction Mechanism. J. Mol. Biol., 273, 714-728 [Abs.]-[PDF]

1998
55. Patel, I.R., Attur, M.G., Patel, R.N., Stuchin, S.A., Abagyan, R.A., Abramson, S.B., and Amin, A.R. (1998). TNF-a convertase enzyme from human arthritis-affected cartilage: Isolation of cDNA by differential display, expression of the active enzyme, and regulation of TNF-a. J. of Immunology, 160, 4570-4579 [Abs.]-[PDF]
57. Isakoff, S.J., Cardozo, T., Andreev, J., Li, Z., Ferguson, K.M., Abagyan, R., Lemmon, M.A., Aronheim, A and Skolnik, E.Y. (1998). Identification and analysis of PH domain-containing targets of phosphatidylinositol 3-kinase using a novel in vivo assay in yeast. Embo J. 17 (18), 5374-87 [Abs.]-[PDF]
58. Zhou, Y. and Abagyan, R. (1998). How and why phosphotyrosine-containing peptides bind to the SH2 and PTB domains. Folding and Design, 3, 513-522 [Abs.]-[PDF]

1999
66. Zhang, H-F., Yu, J., Chen, S., Morgan, B.P., Abagyan, R. and Tomlinson, S. (1999). Identification of the Individual Residues that Determine Human CD59 Species Selective Activity. J.Biol.Chem., 274, 10969-10974 [Abs.]-[PDF]

2000
70. Gantt, S., Persson, C., Rose, K., Birkett, A.J., Abagyan, A. and Nussenzweig, V. (2000). Antibodies against TRAP do not inhibit Plasmodium sporozoite infectivity in vivo. Infection and Immunity Jun; 68(6), 3667-3673 [Abs.]-[PDF]
74. Tomko, R.P., Totrov, M., Abagyan, R. and Philipson, L. (2000). Expression of the Adenovirus Receptor and Its Interaction with the Fiber Knob. Experimental Cell Research, Feb 25;255(1), 47-55 [Abs.]-[PDF]