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Theoretical Biophysics Group
Structural Biology Software Database
NIH Resource for Macromolecular Modeling and Bioinformatics
UIUC
Structural Biology Software Database

Application Index

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Category: Physics Tools (2 entries)

A collection of Physics Applications related to Structural Biology.

CRYSTALG

CRYSTALG is a free program which locates low-energy minima by deformation (smoothing) of the potential energy surface of crystals and coupling the superbasins in the original energy surface to basins in a highly deformed energy surface. At present two hardware platforms are supported: IBM SP2 and Linux.
View Application Entry for CRYSTALG

Gibbs (Gibbs-ensemble simulation with cavity-biased insertion)

The program Gibbs performs Gibbs-ensemble simulations to determine the densities of coexisting liquid and vapor phases in equilibrium with each other. The particle exchange step can be performed with the cavity-biased method of Mezei.
View Application Entry for Gibbs (Gibbs-ensemble simulation with cavity-biased insertion)


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